Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841694.1_cds_XP_016508058.1_21119
CDS Infomation

[gene=LOC107825688] [db_xref=GeneID:107825688] [protein=probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7] [protein_id=XP_016508058.1] [location=join(27148..29129,29261..29534,31101..31394)] [gbkey=CDS]
Sequence

ATGTTGTCCAAATCGTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCAGTGATG
GGCCGCGAGAAAAGGCGGCTGCCACGGGTTATGACAGTTGCTGGAGTTATTTCTGAGCTT
GATGATGATCAAGCTAACAGTGTTACATCAGATGTTCCATCATCTATTATTGTAGATCGA
ATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGCCAGATAATAAAGGA
TGGAGTTTTAGTTGGGATGATGATTCATTGTTGTTGCACATAAAAGACGGGTTGCCAGAT
GATATGGAAGTTCTCTATGTTGGTTGTTTAAGGGTTGAGGTTGATTCAAGCGAACAGGAC
GATGTTTCGCAGTTACTGTTGGATAGGTTTAAATCTGTTCCGGCTTTTCTCCCACCAGAC
ATTTTATCTAAATATTATCATGGTTTTTGCAAACAGCATTTATGGCCACTTTTCCATTAT
ATGCTTCCATACTCTGCAAGTCATGGCAGTCGATTTGATCGGTCATGGTGGGAGGCATAT
GTTGCAGCAAACAAGATATTTTCCCAAAAGGTGATTGAGGTGATAAATCCAGATGATGAT
TTTGTCTGGATCCATGATTATCATTTAATGGTTTTACCTACATTCTTGCGTAGGCGTTTC
AATAGGTTGCGAATGGGTTTTTTCCTGCATAGCCCTTTTCCTTCATCAGAGATATATAGG
ACTCTTCCGGTAAGAGAAGAAATTCTCAAGGCTCTATTGAATGCCGACCTGATTGGTTTC
CATACATTCGATTATGCGCGGCATTTCCTGTCCTGTTGTAGTCGCATGTTGGGATTAGAG
TATCAGTCAAAGAGGGGTTACATCGGGCTTGAATACTACGGACGGACTGTGGGGATCAAG
ATTATGCCAGTTGGGATTCACATGGGGCAGATTGAGACCGTGCTTCAACTAGCAGATAGA
GAGTGGAGAGTCGGAGAGCTTAAGCAGCAGTTTGAAGGTAAAACTGTTTTACTTGGTGTT
GATGATATGGACATTTTCAAAGGTGTCAATTTGAAACTTCTTGCCTTGGAAGAAATGTTA
AAACAGCATCCGAAGTGGCAGGGAAGGGCAGTGCTGGTACAGATTGCTAATCCGGCTCGA
GGAAAAGGAAAAGATCTTGAGGAAATACAAGAAGAAATACAAACAAGTATCAAAAGAATC
AATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCTCAGTTTCT
CTTAGTGAACGGACTGCCTATTACACTGTAGCCGAGTGTGTAGTTGTTACAGCAGTAAGA
GATGGCATGAACCTTACTCCATATGAATACATTGTGAGCAGGCAGGGCATCCCTGGTTCA
GACTGCACTGCAGAGTCAAATGGTCAGAAAAAGAGCATGTTGGTAGTGTCCGAGTTCATT
GGATGTTCTCCTTCACTAAGTGGTGCTATACGTGTTAACCCATGGAATGTGGAAGCAACT
GCAGAAGCACTAAATGAAGCAATTTCAATGGCTGATGCTGAGAAGGTGTTGCGCCATGAA
AAGCATTATAAATATGTAAGCACACACGACGTAGCCTATTGGTCAAGAAGCTTTTTCCAG
GATCTGGAGAGAACTTGCAAAGACCATTTTAGAAGACGTTGCTGGGGTATTGGTCTGAGC
TTTGGTTTTAGAGTTGTTGCACTTGATCCCAATTTCAGGAAGCTGTCCATGGATAATATT
GTTTCTTCTTACTCAAAAGCCAAAAATAGAGCAATATTGTTGGATTATGATGGCACTCTA
ATGCCTCAAACATCCATCAATAAGGTCCCTAGTCCTGAAGTTATTTCAATTATTAATACA
CTTTGTGGTGATGAAAGAAATACTGTGTTTCTCGTGAGCGGACGAGGAAGGGATAGTTTA
GGCCGGTGGTTTTCTCCGTGTGAGAAACTTGGCATTGCTGCGGAGCATGGATACTTCTTA
AGGTGGTCTGCAGATAAAGAATGGGAAGTCTGTGGGCAGAACAGTGATTTCCAGTGGATG
CAGATTGCTGAACCTGTTATGAAGCAGTATACAGAAGCCACAGATGGCTCTTACATTGAA
ACAAAGGAGAGTGCTCTGGTTTGGCATCATCGGGATGCAGATCTTGGTTTTGGGTCTTGC
CAAGCAAAAGAGATGTTAGACCATCTTGAAAGTGTGCTTGCAAATGAGCCTGTTGCTGTG
AAGAGTGGGCAATTCATTGTTGAAGTTAAGCCTCAGGGAGTCAGTAAAGGTCTAGTTGCA
GAGAAAATTTTCGCATCAATGGCTGAGAGTGGCCGGCAGGCTGATTTCGTGATGTGCGTA
GGTGATGATAGGTCTGATGAGGACATGTTTGAGATTATTGGAAATGCAATGAATAGCGGT
ATACTTTCTTCAAGCACAGAAGTGTATGCCTGCACAGTGGGACAAAAGCCAAGTAAAGCC
AAATATTATCTTGATGACACAACAGAAGTTAGAACCATGCTTCAAGCTCTTGCCGAGGAA
TCCACTCCTCCGCCCTCATCAGAAATTTAA

Peptide Sequence

PEP ID

XP_016508058.1
PEP Infomation

PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [Nicotiana tabacum]
Sequence

MLSKSYTNLLDLASGNFPVMGREKRRLPRVMTVAGVISELDDDQANSVTSDVPSSIIVDR
IIIVANQLPVKAKRRPDNKGWSFSWDDDSLLLHIKDGLPDDMEVLYVGCLRVEVDSSEQD
DVSQLLLDRFKSVPAFLPPDILSKYYHGFCKQHLWPLFHYMLPYSASHGSRFDRSWWEAY
VAANKIFSQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYR
TLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIK
IMPVGIHMGQIETVLQLADREWRVGELKQQFEGKTVLLGVDDMDIFKGVNLKLLALEEML
KQHPKWQGRAVLVQIANPARGKGKDLEEIQEEIQTSIKRINDKFRQPGYEPIVFIDRSVS
LSERTAYYTVAECVVVTAVRDGMNLTPYEYIVSRQGIPGSDCTAESNGQKKSMLVVSEFI
GCSPSLSGAIRVNPWNVEATAEALNEAISMADAEKVLRHEKHYKYVSTHDVAYWSRSFFQ
DLERTCKDHFRRRCWGIGLSFGFRVVALDPNFRKLSMDNIVSSYSKAKNRAILLDYDGTL
MPQTSINKVPSPEVISIINTLCGDERNTVFLVSGRGRDSLGRWFSPCEKLGIAAEHGYFL
RWSADKEWEVCGQNSDFQWMQIAEPVMKQYTEATDGSYIETKESALVWHHRDADLGFGSC
QAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFASMAESGRQADFVMCV
GDDRSDEDMFEIIGNAMNSGILSSSTEVYACTVGQKPSKAKYYLDDTTEVRTMLQALAEE
STPPPSSEI

Transcript Sequence

Gene sequence data has not been registered.